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C2B2/MAGNet Seminars
- Dec 2009 Events
- Dec 09. 2009 3pm-4-pm
- Title: Discrete Methods for the Computational Analysis of Biological Networks and Pathways.
- Speaker: Ron Pinter
- Affiliation: Dept of Computer Science Technion Israel / On Sabbatical Princeton University
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor C2B2 Common Room 816
- Host: Raul Rabadan
- Abstract:
Abstract_for_Dr._Ron_Y._Pinter_Seminar_on_12-09-09.docx
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- Nov 2009 Events
- Nov 10. 2009 3:15-4:15
- Title: Graphical Causal Modeling of Protein Structural and Dynamical Features (Journal Club Seminar)
- Speaker: Kate Stafford (Palmer lab)
- Affiliation: Columbia University
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor C2B2 Common Room 816
- Host: Richard Friedman
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- Nov 04. 2009 3pm-4pm
- Title: Population Genetic Inference in the Personal Genome Era
- Speaker: Carlos Bustamante
- Affiliation: Cornell University
- Location: 1130 St. Nicholas Ave ICRC Bldg 8th Floor C2B2 Common room 816
- Host: Andrea Califano
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- Oct 2009 Events
- Oct 14. 2009 11am-12pm
- Title: Genetic Predisposition to Chronic Pain following Nerve Injury
- Speaker: Ariel Darvasi
- Affiliation: The Hebrew University of Jerusalem / Israel
- Location: 1130 St. Nicholas Ave, ICRC Bldg 8th Floor C2B2 Common Room 816
- Host: Itshack (Itsik) Pe'er
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- Oct 07. 2009 4pm-5pm
- Title: Adaptive Gene Expression Evolution in Yeast and Mice.
- Speaker: Hunter Fraser
- Affiliation: Stanford University / Dept of Biology
- Location: 1130 St. Nicholas Ave, ICRC Bldg 8th Floor C2B2 Common Room 816
- Host: Raul Rabadan
- Movie:
HunterFraser_Oct_07_2009.mpg
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- Sep 2009 Events
- Sep 16. 2009 3pm-4pm
- Title: Information Flow in Biological Networks: Taking optimization Principles Seriously
- Speaker: William (Bill) Bialek
- Affiliation: Princeton University
- Location: ICRC Bldg 1130 St. Nicholas Ave 8 Floor C2B2 common room 816
- Host: Raul Rabadan
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- Jun 2009 Events
- Jun 10. 2009 4pm-5pm
- Title: To Die or Not to Die, that is the Question
- Speaker: Peter K. Sorger
- Affiliation: Dept. of Systems Biology, Harvard Medical School/ Dept. of Biological Engineering, MIT
- Location: 1130 St. Nicholas Ave ICRC Bldg 8th Floor C2B2 Common Romm 816
- Host: Dennis Vitkup
- Movie:
PeterSorger_Jun_10_2009.mpg
- Abstract:
Prof._Peter_Sorger_-_Abstract_for_his_Lecture_on_06-10-09.doc
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- May 2009 Events
- May 22. 2009 2pm-3pm
- Title: Information Directed Molecular Technology: Programming Nicleic Acid Self-assembly.
- Speaker: Peng Yin
- Affiliation: California Institute of Technology/ Dept. of Bioengineering, Dept. of Computer Science
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor C2B2 Common room 816
- Host: Dimitris Anastassiou
- Abstract:
Dr._Peng_Yin_Abstract_for_his_talk_on_05-22-09.docx
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- Apr 2009 Events
- Apr 15. 2009 4pm-5pm
- Title: Oncogenic Transcriptional Networks Controlled by NOTCH1 in Human Leukemia.
- Speaker: Adolfo Ferrando
- Affiliation: Columbia University/ Institute for Cancer Genetics
- Location: ICRC Bldg 1130 St. Nicholas Ave 8 Floor C2B2 common room 816
- Host: Raul Rabadan
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- Apr 01. 2009 4pm-5pm
- Title: Novel Approaches to Drug Discovery and Cancer Metabolomics.
- Speaker: Jeffrey Skolnick
- Affiliation: Georgia Institute of Technology/Director Ctr for the Study of Systems Biology
- Location: ICRC Bldg 1130 St. Nicholas Ave 8 Floor C2B2 Common room 816
- Host: Barry Honig
- Abstract:
Prof._Jaffrey_Skolnick_-_Abstract_of_his_Lecture_on_04-01-09.doc
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- Mar 2009 Events
- Mar 23. 2009 4pm-5pm
- Title: Molecular Logic Gates and Network Medicine.
- Speaker: Rune Linding
- Affiliation: Institute of Cancer Research / United Kingdom
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor C2B2 Common room 816
- Host: Andrea Califano
- Abstract:
Dr.Rune_Linding_-_Abstract_for_his_talk_on_03-23-09.doc
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- Mar 18. 2009 3pm-4pm
- Title: New Opportunities and Challenges in Protein Network Analysis.
- Speaker: Trey Ideker
- Affiliation: University of California, San Diego/ Dept. of Bioengineering
- Location: ICRC Bldg 1130 St. Nicholas Ave 8 Floor C2B2 common room 816
- Host: Andrea Califano
- Movie:
TreyIdeker_Mar_18_2008.mpg
- Abstract:
Prof._Ideker_-_Abstract_of_his_Lecture_on_03-18-09.doc
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- Feb 2009 Events
- Feb 25. 2009 4pm-5pm
- Title: Detecting Differentially Methylated Regions with Microarray Data.
- Speaker: Rafael Irizarry
- Affiliation: Johns Hopking Bloomberg School of Public Health / Dept. of Biostatistics
- Location: ICRC Bldg 1130 St. Nicholas Ave 8 Floor C2B2 common room 816
- Host: Raul Rabadan
- Email: rabadan@c2b2.columbia.edu
- Abstract:
Prof._Rafael_Irizarry_-_Abstract_for_his_talk_on_02-25-09.docx
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- Feb 11. 2009 4pm-5pm
- Title: Systems Biology of Cancer Cells
- Speaker: Chris Sander
- Affiliation: Memorial Sloan-Kettering Cancer Center / Sloan - Kettering Institute
- Location: 1130 St. Nicholas Ave ICRC Bldg C2B2 8 Floor Common room 816
- Host: Barry Honig
- Movie:
ChrisSander_Feb_11_2009.mpg
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- Jan 2009 Events
- Jan 21. 2009 4:00pm-5:00pm
- Title: Deep Small RNA Sequencing, SNP Discovery and De Novo Assembly with the SOLiD Analyzer.
- Speaker: Tood P. Michael
- Affiliation: Rutgers University
- Location: ICRC Bdlg 1130 St. Nicholas Ave 8 Floor C2B2 Common room 816
- Host: Raul Rabadan
- Abstract:
Dr._Todd_P_Michael_-_Abstract_of_his_talk_on_01-21-09.doc
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- Jan 14. 2009 4pm-5pm
- Title: Design Principles of Biochemical Oscillators.
- Speaker: John J. Tyson
- Affiliation: Virginia Polytechnic Institute & State University
- Location: ICRC Bldg 1130 St. Nicholas Ave 8 Floor C2B2 Common room 816
- Host: Andrea Califano
- Movie:
JohnTyson_Jan_14_2009.mpg
- Abstract:
Prof._John_J_Tyson_Lecture_Abstract.doc
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- Dec 2008 Events
- Dec 15. 2008 4-5pm
- Title: "Life on the Edge: The Evolutinary Biology of RNA Viruses"
- Speaker: Eddie Holmes
- Affiliation: Penn State University
- Location: 1130 St. Nicholas Ave ICRC Bldg 8 Floor Room 816
- Host: Raul Rabadan
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- Dec 03. 2008 3pm-4pm
- Title: "Protein Sectors: Functional Units of Tertiary Structute"
- Speaker: Olivier Rivoire
- Affiliation: Rockefeller University
- Location: 1130 St. Nicholas Ave ICRC Bldg 8 Floor Room 816
- Host: Raul Rabadan
- Email: rabadan@c2b2.columbia.edu
- Abstract:
Dr._Olivier_Rivoire_-_Abstract_for_his_talk.doc
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- Nov 2008 Events
- Nov 25. 2008 3:15-4:15
- Title: Facilitated Variation, Modularity at the Origin of Biological Form (Journal Club Seminar).
- Speaker: German Plata
- Affiliation: Columbia University
- Location: Common Room (room 816) Irving Cancer Research Building
- Host: Dennis Vitkup
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- Nov 19. 2008 4pm-5pm
- Title: Microbe Hunting in the 21st Century
- Speaker: Ian Lipkin
- Affiliation: Columbia University / MSPH Epidemiology Dept.
- Location: 1130 St. Nicholas Ave ICRC Bldg C2B2 8 Floor Common Room 816
- Host: Raul Rabadan
- Movie:
IanLipkin_Nov_19_2008.mpg
- Abstract:
Prof.W_Ian_Lipkin_-_abstract_of_his_talk_.doc
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- Nov 17. 2008 11:30pm-12:30pm
- Title: Pharmacogenomic Studies on adverse Drug Reactions
- Speaker: Ann Daly
- Affiliation: University of Newcastle, UK
- Location: ICRC Bldg 1130 St. Nicholas Ave NYC 8 Floor C2B2 Common Room 816
- Host: Itshack (Itsik) Pe'er
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- Nov 11. 2008 4pm-5pm
- Title: Coarse-Graining Biochemical Networks
- Speaker: Ilya Nemenman
- Affiliation: Los Alamos National Laboratory, Los Alamos, NM
- Location: 1130 St. Nicholas Ave ICRC Bldg 8 Floor Room 816
- Host: Andrea Califano
- Email: ilya@menem.com
- Abstract:
Dr._Ilya_Nemenman_-_Abstract_for_his_talk.docx
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- Nov 05. 2008 4pm-5pm
- Title: A Cognitive Framework for Understanding Cellular Behavior
- Speaker: Saeed Tavazoie
- Affiliation: Princeton University
- Location: 1130 St. Nicholas Ave ICRC Bldg 8th Floor Room 816
- Host: Andrea Califano
- Email: tavazoie@genomics.princeton.edu
- Movie:
Tavazoie_Nov_05_2008.mpg
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- Oct 2008 Events
- Oct 28. 2008 3;15-4:15
- Title: The Evolution of Influenza virus.
- Speaker: Raul Rabadan
- Affiliation: Columbiia University Center for Computational Biology and Department of Biomedical Informatics
- Location: 1130 St. Nicholas Ave ICRC Bldg 8 Floor Room 816
- Host: Richard Friedman
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- Oct 22. 2008 4pm-5pm
- Title: "Whole Genome, Whole Population Detection of Hidden Relatedness"
- Speaker: Itshack (Itsik) Pe'er
- Affiliation: Columbia University
- Location: 1130 St. Nicholas Ave ICRC Bldg 8 Floor Room 816
- Email: ip2169@columbia.edu
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- Oct 15. 2008 4pm-5pm
- Title: "Predicting Expression from Sequence: Data-driven Mechanistic Models of (post-) Transcriptional Networks."
- Speaker: Harmen Bussemaker
- Affiliation: Columbia University/ Dept. of Biological Sciences
- Location: 1130 St. Nicholas Ave ICRC Bldg C2B2 8 Floor common room 816
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- Oct 08. 2008 4pm-5pm
- Title: Intriguing Rules for Small Non-coding RNAs in the Cellular Regulatory Networks
- Speaker: Hanah Margalit
- Affiliation: The Hebrew University Jerusalem Israel
- Location: ICRC Bldg 1130 St. Nicholas Ave C2B2 8 Floor Room 816
- Host: Barry Honig
- Email: hanahm@ekmd.huji.ac.il
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- Oct 07. 2008 3:15-4:15
- Title: So "YOUR" bacteria can save mankind... Now prove it's yours!! Watermarking genetically modified organisms (Journal club seminar)
- Speaker: El-ad David Amir (Integrated Program)
- Affiliation: Columbia University
- Location: 3:15-4:15 Common Room (room 816) Irving Cancer Research Building
- Host: Dennis Vitkup
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- May 2008 Events
- May 12. 2008 3pm-4pm
- Title: Mesoscale Modeling of Macromolecular Machines by Normal Modes
- Speaker: Michael Levitt
- Affiliation: Stanford University
- Location: ICRC Bldg 8th Floor common room 1130 St. Nicholas Ave NY, NY 10032
- Host: Barry Honig
- Email: bh6@columbia.edu
- Movie:
MichaelLevitt_May_12_2008.mpg
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- Apr 2008 Events
- Apr 23. 2008 3pm-4pm
- Title: Alternative Splicing in Tumors: Detection and Interpretation.
- Speaker: Terry Speed
- Affiliation: University of California, Berkeley
- Location: ICRC Bldg 1130 St. Nicholas Ave C2B2 common room 816
- Movie:
TerrySpeed_Apr_23_2008.mpg
- Slides:
TerrySpeedSlides_Apr_23_2008.pdf - Abstract:
Prof._Terry_Speed_-_Lecture_Abstract.doc
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- Apr 15. 2008 3:00-4:00
- Title: Predicting functional transcription factor binding through alignment-free affinity-based analysis of orthologous promoter sequences.(Journal Club Seminar)
- Speaker: Luke Ward (Bussemaker Lab)
- Affiliation: Columbia University
- Location: 816 (Common Room) HICCC
- Host: Richard Friedman
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- Apr 01. 2008 3pm-4pm
- Title: Statistical and conformational analysis of the electron density of protein side chains (Journal Club Seminar)
- Speaker: Tonya Silkov (Murray lab)
- Affiliation: Columbia University
- Location: Common Room (Room 816) Irving Cancer Research Building
- Host: Richard Friedman
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- Mar 2008 Events
- Mar 26. 2008 3pm-4pm
- Title: "Evolution of Eukaryotic Transcription Circuits"
- Speaker: Hao Li
- Location: ICRC Bldg 1130 St. Nicholas Ave C2B2 common room 816
- Host: Harmen Bussemaker
- Email: haoli@genome.ucsf.edu
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- Mar 25. 2008 3pm-4pm
- Title: Information Bottleneck - Data clustering while preserving Information (Journal Club Seminar)
- Speaker: Anil Raj
- Affiliation: Columbia University
- Location: 816 (Common room) HICCC
- Host: Dennis Vitkup
- Abstract:
Anil_Raj_Abstract.txt
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- Mar 05. 2008 3pm-4pm
- Title: "Motifs, Modules, and Machine Learning: Recent Progress and Future Challenges"
- Speaker: Chris Wiggins
- Affiliation: Dept. Applied Physics & Applied Mathematics/ Columbia University
- Location: ICRC Bldg 1130 St. Nicholas Ave C2B2 8 Floor Common room 816
- Host: Aris Floratos
- Email: chris.wiggins@columbia.edu
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- Feb 2008 Events
- Feb 27. 2008 3pm-4pm
- Title: Regulatory Genomics of Drosophila and Mammalian Genomes.
- Speaker: Manolis Kellis
- Affiliation: MIT/Computer Science/Broad Institute
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor Room 816
- Host: Barry Honig
- Email: manoli@mit.edu
- Movie:
ManolisKellis_Feb_27_2008.mpg
- Abstract:
Dr._Kellis_talk_-_Abstract.doc
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- Feb 06. 2008 3pm-4pm
- Title: Toward Millisecond-Scale Molecular Dynamics Simulations of Proteins.
- Speaker: David E. Shaw
- Affiliation: Columbia University
- Location: ICRC Bldg 1130 St. Nicholas Ave NY, NY 8th Floor C2B2 common room 816
- Host: Barry Honig
- Email: bh6@columbia.edu
- Abstract:
Abstract_for_Dr._Shaw_seminardoc
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- Feb 05. 2008 3-4 pm
- Title: Intrinsic protein disorder: molecular function and prediction from sequence (Journal Club Seminar)
- Speaker: Avner Schlesinger
- Location: ICRC Bldg 1130 St. Nicholas Ave NY, NY 8 Floor C2B2 common room 816
- Host: Student Seminar/Journal Club
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- Jan 2008 Events
- Jan 30. 2008 3pm-4pm
- Title: Activity Patterns in Biological Networks: Statistical Analysis and Network Reconstruction
- Speaker: Daphne Koller
- Affiliation: Stanford University
- Location: ICRC Bldg 1130 St. Nicholas Ave NY, NY 8 Floor C2B2 common room 816
- Email: Koller@CS.Stanford.EDU
- Abstract:
Lecture_Abstract.doc
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- Dec 2007 Events
- Dec 11. 2007 3pm-4pm
- Title: The Origins of Genome Complexity (Journal Club Seminar)
- Speaker: Dennis Vitkup
- Affiliation: Columbia University
- Location: Common Room (Room 816) Irving Cancer Research Building
- Host: Richard Friedman
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- Nov 2007 Events
- Nov 27. 2007 3pm-4pm
- Title: Protein--Protein Interactions: Hot Spots and Structurally Conserved Residues often Locate in Complemented Pockets that Pre-organized in the Unbound States:Implications for Docking (Journal Club Seminar)
- Speaker: Brian Chen (Honig lab)
- Affiliation: Columbia University
- Location: CRC Bldg 1130 St. Nicholas Ave NY, NY 8 Floor C2B2 common room 816
- Host: Dennis Vitkup
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- Nov 14. 2007 3pm-4pm
- Title: “Computational Dissection of Mammalian Genome Regulation SubNetworks”
- Speaker: Micheal Zhang
- Affiliation: Lab Cold Spring Harbor
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor Common Room 816
- Host: Andrea Califano
- Email: mzhang@cshl.edu
- Abstract:
Michael_Q._Zhang_Abstact.doc
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- Oct 2007 Events
- Oct 10. 2007 4pm-5pm
- Title: SMASH: Single Molecule Approach to Sequencing by Hybridization
- Speaker: Bud Mishra
- Affiliation: New York University
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor common room 816
- Host: Andrea Califano
- Email: califano@c2b2.columbia.edu
- Movie:
2007-10-10 Mishra Seminar.mpg
- Abstract:
Dr._Mishra_presentation_abstract.doc
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- Jun 2007 Events
- Jun 27. 2007 3pm-4pm
- Title: Sarcomagenesis and Molecular Events Associated with Sarcoma Progression
- Speaker: Carlos Cordon-Cardo
- Affiliation: Columbia University/ Dept. of Pathology
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor Common room 816
- Host: Andrea Califano
- Email: cordon-c@columbia.edu
- Abstract:
Dr._Carlos_Cordon-Cardo_AbstractC2B2-07.doc
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- May 2007 Events
- May 30. 2007 3pm-4pm
- Title: “The Deterministic Mutation Hypothesis Revisited: Co-evolution of Robustness, Epistasis, and Recombination Favors Asexual Reproduction
- Speaker: Aviv Bergman
- Affiliation: Albert Einstein College of Medicine/Dept of Pathology
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor Common room 816
- Host: Andrea Califano
- Email: aviv@bergman.org
- Movie:
Bergman_May_30_07.mpg
- Abstract:
Abstrac-_Dr._Aviv_Bergman_talk.doc
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- May 23. 2007 4pm-5pm
- Title: Human Diseasome: From Networks to Human Diseases.
- Speaker: Albert-Laszlo Barabasi
- Affiliation: University of Notre Dame / Dept of Physics
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor Common room 816
- Host: Andrea Califano
- Email: alb@nd.edu
- Movie:
Barabasi_May_23_07.mpg
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- May 16. 2007 3pm-4pm
- Title: Biological Context Networks: Towards a more Sensitive Predictive Biology of Disease using Network Signatures
- Speaker: Simon Kasif
- Affiliation: Boston University/Dept. of Biomedical Engineering
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor Common room 816
- Host: Andrea Califano
- Email: kasif@encg.bu.edu
- Movie:
Kasif_May_16_07.mpg
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- May 02. 2007 4pm-5pm
- Title: Pre-Seady-State Decoding of the Bicoid Morphogen gradient
- Speaker: Sven Bergmann
- Affiliation: Dept. of Medical Genetics/Univ de Lausanne Switzerland
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor Common room 816
- Host: Itshack (Itzik) Pe'er
- Email: itsik@cs.columbia.edu
- Abstract:
Abstract_-_Dr._Sven_Bergmann_talk.doc
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- Apr 2007 Events
- Apr 18. 2007 3pm-4pm
- Title: Analysis Methods for Association Studies in General and Special Populations
- Speaker: Itshack (Itzik) Pe'er
- Affiliation: Dept. of Computer Science, Columbia University
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor common Rm 816
- Host: Aris Floratos
- Email: ip2169@columbia.edu
- Movie:
ItsikPeer_Apr_18_07.mpg
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- Apr 11. 2007 3pm-4pm
- Title: Deriving the Single-Neuron Transcriptome of C. Elegans to Infer Mechanisms for Synaptic Connectivity.
- Speaker: David M. Miller
- Affiliation: Vanderbilt University/ Dept. of Cell and Developmental Biology
- Location: 1130 St. Nicholas Ave 8th Floor Room 817
- Host: Dimitris Anastassiou
- Email: david.m.miller@vanderbilt.edu
- Movie:
Miller_Apr_11_07.mpg
- Abstract:
Dr._Miller_talk_-abstract.doc
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- Mar 2007 Events
- Mar 21. 2007 3pm-4pm
- Title: Deciphering the DNA Recognition Code of Natural and Synthetic Transcription Factors
- Speaker: Aseem Ansari
- Affiliation: University of Wisconsin-Madison/Dept. of Biochemistry & Genome Center
- Location: 1130 St. Nicholas Ave 8th Floor Common room 817
- Host: Barry Honig
- Email: ansari@mail.biochem.wisc.edu
- Movie:
Ansari_Mar_21_07.mpg
- Abstract:
Abstract_for_Dr._Ansari_talk.doc
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- Feb 2007 Events
- Feb 28. 2007 3pm-4pm
- Title: The Novel Biophysics of Cell Adhesion
- Speaker: Lawrence Shapiro
- Affiliation: HHMI, Columbia University / Dept. of Biochem and Molecular Biophysics
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor Common room 816
- Host: Aris Floratos
- Email: shapiro@convex.hhmi.columbia.edu
- Movie:
Shapiro_Feb_28_07.mpg
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- Feb 21. 2007 3pm-4pm
- Title: The Evolution of Influenza Virus during the 20th and 21st Centuries
- Speaker: Arnold Levine
- Affiliation: Institute for Advanced Study/School of Natural Sciences
- Location: ICRC 1130 St. Nicholas Ave 8th Floor common room 817
- Host: Andrea Califano
- Email: alevine@ias.edu
- Movie:
Levine_Feb_21_07.mpg
- Slides:
Levine_talk_-_Feb_07.ppt - Abstract:
Abstract_for_Dr._Levine_talk.doc
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- Dec 2006 Events
- Dec 13. 2006 3pm-4pm
- Title: Genetic Variation and Regulatory Networks: Mechanisms and Complexity
- Speaker: Dana Pe'er
- Affiliation: Columbia University
- Location: ICRC Bldg 1130 St. Nicholas Ave 8th Floor Common room 816
- Host: Aris Floratos
- Email: dp2315@columbia.edu
- Movie:
Peer-Dec-06.mpg
- Abstract:
Dr._Peer_abstract.doc
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- Nov 2006 Events
- Nov 29. 2006 3pm-4pm
- Title: Nuclear Pore Complexes: The Hole Picture?
- Speaker: Michael Rout
- Affiliation: The Rockefeller University
- Location: 1130 St. Nicholas Ave 8th Floor Common Room 816
- Host: Andrea Califano
- Email: rout@mail.rockfeller.edu
- Movie:
Rout-Nov-06.mpg
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- Nov 15. 2006 3pm-4pm
- Title: Similarity measures and Similarity Searches in Genome-wide Numeric Data Sets or Blast the Vectors.
- Speaker: Arcady Mushegian
- Affiliation: Director of Bioinformatics Center/ Stowers Institute for Medical Research
- Location: 1130 St. Nicholas Ave 8th Floor Common Room 816
- Host: Andrey Rzhetsky
- Email: ARM@stowers-institure.org
- Slides:
Mushegian-Slides-Nov-06.ppt
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- Oct 2006 Events
- Oct 25. 2006 3pm-4pm
- Title: Systems Biology, Cancer Stem Cells, and Inferring Genetic Regulatory Networks.
- Speaker: Stuart Kauffman
- Affiliation: Institute for Biocomplexity and Informatics - University of Calgary, Canada
- Location: 1130 St. Nicholas Ave 8th Floor Common Room 816
- Host: Andrea Califano
- Email: skauffman@ucalgary.ca
- Movie:
Kauffman-Oct-06.mpg
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- Oct 18. 2006 3pm-4pm
- Title: Embedding Computation in Studies of Protein Structure and Function.
- Speaker: Chris Bailey-Kellogg
- Affiliation: Computer Science Dartmouth University
- Location: 1130 St. Nicholas Ave 8th Floor Common room 816
- Host: Andrea Califano
- Email: cbk@cs.dartmouth.edu
- Movie:
Bailey-Oct-06.mpg
- Abstract:
Abstract.doc
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- Sep 2006 Events
- Sep 20. 2006 4:30pm-5:30pm
- Title: Understanding and Exploiting the Evolution of Eukaryotic Regulatory Sequences.
- Speaker: Michael Eisen
- Affiliation: University of California, Berkeley
- Location: ICRC Bldg 1130 St. Nicholas Ave. 8th Floor Common Room 816
- Host: Harmen Bussemaker
- Email: mbeisen@lbl.gov
- Movie:
Eisen talk - 9-20-06.mpg
- Slides:
Eisen_slides_-_Sept_20_06.ppt
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- Jun 2006 Events
- Jun 14. 2006 4:30pm-5:30pm
- Title: Inference of sets of synergistically interacting genes from microarray data
- Speaker: Dimitris Anastassiou
- Affiliation: Columbia University
- Location: ICRC Bldg/ Aud III 8th Floor Common Room 816
- Slides:
AnastassiouSlides_6_14_06.ppt - Abstract:
Dr._Anastassiou_Seminar_Abstract.pdf
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- Jun 07. 2006 3pm-4pm
- Title: Cancer knowledge exploration and modeling with OncoTCap
- Speaker: Roger Day
- Affiliation: University of Pittsburgh
- Location: ICRC Bldg/ Aud III 8th Floor Common Room 816
- Host: Aris Floratos
- Abstract:
Roger_Day_Abstract_6-7-06.pdf
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- May 2006 Events
- May 24. 2006 4:30pm-5:30pm
- Title: MINDY: An Algorithm for the Genome-wide Discovery of Modulators of Transcriptional Interactions
- Speaker: Kai Wang
- Affiliation: Columbia University
- Location: ICRC Bldg/ Aud III 8th Floor Common Room 816
- Movie:
Wang_5_24_06.mpg
- Slides:
MAGNET_May24_Kai_Wang_posted.ppt
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- May 17. 2006 4:30pm-5:30pm
- Title: Computational and Experimental Approaches to the Study of Protein-DAN Interactions and Gene Regulation.
- Speaker: Gary Stormo
- Affiliation: Professor, Division of Biology & Biomedical Sciences/ Washinton Univ. in St. Louis
- Host: Harmen Bussemaker
- Email: stormo@ural.wustl.edu
- Slides:
StormoSlides-5-17-06.ppt
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- May 03. 2006 4:30pm-5:30pm
- Title: Structure, Function, and Evolution of Cellular Networks.
- Speaker: Dennis Vitkup
- Affiliation: Joint Ctrs.for Systems Biology, Columbia University
- Location: ICRC Bldg/ Aud III 8th Floor Common Room 816
- Email: dv2121@columbia.edu
- Movie:
Vitkup_05_03_2006.mpg
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- Apr 2006 Events
- Apr 26. 2006 4:30pm-5:30pm
- Title: Coping with Cenetic and Non-Genetic Variations.
- Speaker: Yitzhak Pilpel
- Affiliation: Dept. of Molecular Genetics/ Weizmann Institute of Science/ Rehovot Israel
- Location: ICRC Bldg/Aud III 8th Floor Common Room 816
- Host: Barry Honig
- Email: pilpel@weizmann.ac.il
- Movie:
Pilpel_4_26_06.mpg
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- Apr 19. 2006 4:30pm-5:30pm
- Title: Revising our View of the Mammalian Transcriptome.
- Speaker: Brendan Frey
- Affiliation: Associate Professor/ Electrical & Compurter Engineering/Univ. of Toronto
- Location: ICRC Bldg/ Aud III 8th Floor Common Room 816
- Host: Christina Leslie
- Email: frey@psi.toronto.edu
- Movie:
Brendan Frey talk - 4-19-06.mpg
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- Mar 2006 Events
- Mar 29. 2006 3pm-4pm
- Title: Predictive Modeling of Condition-Specific Regulation Of mRNA Stability
- Speaker: Harmen Bussemaker
- Affiliation: Joint Ctrs.for Systems Biology, Columbia University
- Location: ICRC Bldg/Aud III 8th Floor Common room
- Host: Aris Floratos
- Email: hjb2004@columbia.edu
- Movie:
Harmen - 3-29-06.mpg
- Slides:
C2B2_Seminar_March_2006_-_combined.pdf - Abstract:
Dr._Bussemaker_Seminar_Abstract.doc
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- Mar 22. 2006 3pm-4pm
- Title: Of yeast, birds, mice, and men: Bayesian machine learning and systems biology.
- Speaker: Alexander Hartemink
- Affiliation: Duke University
- Location: Irving Cancer Research Center Bldg, 8th Floor Conference Room
- Host: Andrea Califano
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- Mar 17. 2006 3pm-4pm
- Title: Rule-based Modeling of Signaling by Epidermal Growth Factor Receptor.
- Speaker: Michael L. Blinov
- Affiliation: Los Alamos National Laboratory, Los Alamos, NM
- Location: 1130 St. Nicholas Ave. ICRC Bldg 8th Floor Common Room
- Host: Chris Wiggins
- Email: mblinov@lanl.gov
- Abstract:
Blinov_Abstract.doc
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- Feb 2006 Events
- Feb 22. 2006 3pm-4pm
- Title: Interactome Neworks
- Speaker: Marc Vidal
- Affiliation: Harvard Medical School
- Location: Irving Cancer Research Center Bldg, 8th Floor Conference Room
- Host: Andrea Califano
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- Jan 2006 Events
- Jan 11. 2006 3pm-4pm
- Title: Transmembrane Protein Structures Without X-rays
- Speaker: Nir Ben-Tal
- Affiliation: Tel Aviv University
- Location: Irving Cancer Research Center Bldg, 8th Floor Conference Room
- Host: Barry Honig
- Slides:
Nir_Ben-Tal_slides_2006.pdf
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- Jan 04. 2006 3pm-4pm
- Title: geWorkbench - A bioinformatics platform for integrated genomics
- Speaker: Aris Floratos
- Affiliation: Columbia University
- Location: Irving Cancer Research Center Bldg, 8th Floor Conference Room
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